Cancer
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Mixed-model and transcriptome-wide association analyses identify transcription factors and genes associated with colorectal cancer susceptibility
Chen, Zhishan; Song, Wenqiang; Li, Qing; Li, Chao; Wen, Wanqing; Huyghe, Jeroen R.; Law, Philip J.; Fernandez-Rozadilla, Ceres; Timofeeva, M. N.; Thomas, Minta; Schmit, Stephanie L.; Martin, Vicente; Devall, Matthew A. M.; Dampier, Christopher Heaton; Moratalla-Navarro, Ferran; Cai, Qiuyin; Wang, Jifeng; Shi, Jiajun; Kweon, Sun-seog; Tanikawa, Chizu; Jia,… Read MoreFeb. 25, 2026
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Mutant GNAS drives a pyloric metaplasia with tumor suppressive glycans in intraductal papillary mucinous neoplasia
Quoc-Huy Trinh, Vincent; Ankenbauer, Katherine E.; Torbit, Sabrina M.; Taranto, Christopher P.; Liu, Jiayue; Batardiere, Maelle; Kumar, Bhoj; Carlo Maurer, Hans; Revetta, Frank L.; Chen, Zhengyi; Kruse, Angela R.S.; Judd, Audra M.; Copeland, Celina; Wong, Jahg; Ben-Levy, Olivia; Jarvis, Brenda; Brown, Monica E.; Brown, Jeffrey W.; Das, Koushik… Read MoreJan. 28, 2026
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SCGclust: Single-Cell Graph Clustering Using Graph Autoencoders That Integrate SNVs and CNAs
Potu, Teja; Hu, Yunfei; Wang, Judy; Chi, Hongmei; Khan, Rituparna; Dharani, Srinija; Ni, Jingchao; Zhang, Liting; Zhou, Xin Maizie; & Mallory, Xian Fan. (2026).聽SCGclust: Single-cell graph clustering using graph autoencoders that integrate SNVs and CNAs.聽Mathematics,聽14(1), 46.聽https://doi.org/10.3390/math14010046 Intra-tumor heterogeneity, or ITH, refers to the differences… Read MoreJan. 28, 2026
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Large-scale integration of omics and electronic health records to identify potential risk protein biomarkers and therapeutic drugs for cancer prevention
Li, Qing; Song, Qingyuan; Chen, Zhishan; Choi, Jung-yoon; Moreno, Victor R.; Ping, Jie; Wen, Wanqing; Li, Chao; Shu, Xiang; Yan, Jun; Shu, Xiaoou; Cai, Qiuyin; Long, Jirong; Huyghe, Jeroen R.; Pai, Rish K.; Gruber, Stephen Bernard; Yang, Yaohua; Casey, Graham R.; Wang, Xusheng; Toriola, Adetunji T.; Li, Li;… Read MoreJan. 28, 2026
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Embedding Sustainability into the Imaging and Care of Patients with Cancer
Northrup, Benjamin E.; Hanneman, Kate A.; Lichter, Katie E.; Rockall, Andrea G.; Zigmund, Beth; D’Anna, Gennaro; Zhang, Zhuoli; Osborne, Joseph R.; Silva, Genevieve S.; Waeldner, Kathleen; Omary, Reed A. (2025). Embedding Sustainability into the Imaging and Care of Patients with Cancer. Radiology: Imaging Cancer, 7(6), e250054. Read MoreOct. 23, 2025
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3D collagen high-throughput screen identifies drugs that induce epithelial polarity and enhance chemotherapy response in colorectal cancer
Harmych, Sarah J., Hasaka, Thomas P., Sievers, Chelsie K., Kang, Seung-woo, Ramirez, Marisol Adelina, Jones, Vivian Truong, Zhao, Zhiguo, Kovtun, Oleg, Wahoski, Claudia C., & Liu, Qi. (2025). 3D collagen high-throughput screen identifies drugs that induce epithelial polarity and enhance chemotherapy response in colorectal cancer. Communications Biology,… Read MoreSep. 26, 2025
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Curating retrospective multimodal and longitudinal data for community cohorts at risk for lung cancer
Li, Thomas Z., Xu, Kaiwen, Chada, Neil C., Chen, Heidi, Knight, Michael, Antic, Sanja, Sandler, Kim L., Maldonado, Fabien, Landman, Bennett A., & Lasko, Thomas A. (2025). Curating retrospective multimodal and longitudinal data for community cohorts at risk for lung cancer. *Cancer Biomarkers: Section A of Disease… Read MoreJul. 28, 2025
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Thymomas and Thymic Carcinomas, Version 2.2025
Riely, Gregory J., Wood, Douglas E., Loo, Billy W., Aisner, Dara L., Akerley, Wallace, Bauman, Jessica R., Bharat, Ankit, Chang, Joe Y., Chirieac, Lucian R., DeCamp, Malcolm, Desai, Aakash, Dilling, Thomas J., Dowell, Jonathan, Durm, Gregory A., Gettinger, Scott, Grotz, Travis E., Gubens, Matthew A., Juloori, Aditya, Lackner,… Read MoreJul. 28, 2025
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Radiomic 鈧� Stress Test’: exploration of a deep learning radiomic model in a high-risk prospective lung nodule cohort
Xiao, David, Forero, Yency, Kammer, Michael N., Chen, Heidi, Paez, Rafael, Heideman, Brent E., Owoseeni, Oreoluwa, Johnson, Ian, Deppen, Stephen A., Grogan, Eric L., & Maldonado, Fabien. (2025). Radiomic 鈥楽tress Test’: Exploration of a deep learning radiomic model in a high-risk prospective lung nodule cohort. *BMJ Open… Read MoreJul. 28, 2025
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Optimizing Biomarker Models for Biologically Heterogeneous Cancers: A Nested Model Approach for Lung Cancer
Woodhouse, Palina; Jackson, Laurel; Kammer, Michael N.; Godfrey, Caroline M.; Antic, Sanja; Zou, Yong; Meyers, Patrick; Gawel, Susan H.; Maldonado, Fabien; Grogan, Eric L.; Davis, Gerard J.; Deppen, Stephen A. 鈥淥ptimizing Biomarker Models for Biologically Heterogeneous Cancers: A Nested Model Approach for Lung Cancer.鈥� Cancer Epidemiology,… Read MoreMay. 21, 2025